I operated in manual again and the same result. A new thing I did find out was that if I only helped the Left Main go up, the rest went up. Before, I was lifting the nose gear and then going to the mains to help them and they would go up and lock. Now, if I just grab the Left Main and help it up, the rest go too.
Perhaps a leak in the left main?? Does that sound like a likely scenario with what I'm seeing?